Ranomics Platform

Wet-lab triage for AI binder-design agents. Yeast display, mammalian display, DMS at library scale.

使うべきか

品質と安全性

B
説明の品質
97%
スキーマの完全性
73%
命名の品質
97%
ポイズニングのリスク
60%
権限の一致
100%
プロトコルへの準拠
100%

検出事項(4)

  • HIGHTool poisoning patterns detected
  • MEDIUMTool 'estimate_cost' description contains placeholder textestimate_cost 内
  • MEDIUMTool description contains suspicious base64-like encoded stringget_experiment_status 内
  • INFOTool description contains placeholder or incomplete textestimate_cost 内

ツール定義とプロトコルへの準拠に関する自動分析に基づいています。

コンテキストコスト

~1,062トークン数(ツール定義)
~719 B一般的なレスポンスサイズ
注意への影響は中程度(128k コンテキストの 0.83%)

これは、サーバーのツールがモデルのコンテキストに読み込まれるたびに消費されるおおよそのトークン数です。数が多いほど、ほかのタスクに使える注意が減ります。

インストール

ワンクリックインストール

これを `claude_desktop_config.json` ファイルに追加してください:

{
  "mcpServers": {
    "mcp": {
      "url": "https://mcp.ranomics.com/mcp"
    }
  }
}

リモートエンドポイント

https://mcp.ranomics.com/mcpstreamable-http

できること

ツール一覧

ツール(7)

🟢 読み取り専用🟡 書き込み🔴 削除⚪ 不明
🟡list_targets

List the calibrated antigen catalogue. Each entry carries target_id, supported_experiment_types, and typical_campaign_range_usd. Use the target_id on submit_experiment to skip human scoping, or use the custom target shape for a one-off antigen.

入力スキーマ

{
  "type": "object",
  "properties": {}
}
🟡estimate_cost(experiment_type, candidate_count, library_diversity, target_kind, target_id)

Non-binding USD cost estimate for a hypothetical submission. Pass target_kind='catalog' + target_id for a calibrated band (requires_human_quote=false), or target_kind='custom' for a placeholder order-of-magnitude band (requires_human_quote=true). Call BEFORE submit_experiment when budgeting matters.

入力スキーマ

{
  "type": "object",
  "properties": {
    "experiment_type": {
      "type": "string",
      "enum": [
        "yeast_display",
        "mammalian_display",
        "dms"
      ]
    },
    "candidate_count": {
      "type": "integer",
      "minimum": 0
    },
    "library_diversity": {
      "type": "integer",
      "minimum": 0
    },
    "target_kind": {
      "type": "string",
      "enum": [
        "catalog",
        "custom"
      ]
    },
    "target_id": {
      "type": "string"
    }
  },
  "required": [
    "experiment_type"
  ]
}
🟡submit_experiment(name, webhook_url, experiment_spec, idempotency_key)

Submit a binder panel for wet-lab triage. The experiment_spec mirrors the curl /api/v1/experiments contract: experiment_type (yeast_display/mammalian_display/dms), target (target_id or custom), library_design, and sequences as {user_key: amino_acid_string} (use ':' as a multi-chain separator). Optional webhook_url receives signed POSTs on every status transition. Optional idempotency_key dedupes retries. Returns the created experiment with status WaitingForConfirmation and a status_log. Poll get_experiment_status to track progress, get_experiment_results when status_log shows Done.

入力スキーマ

{
  "type": "object",
  "properties": {
    "name": {
      "type": "string"
    },
    "webhook_url": {
      "type": "string",
      "format": "uri"
    },
    "experiment_spec": {
      "type": "object",
      "properties": {
        "experiment_type": {
          "type": "string",
          "enum": [
            "yeast_display",
            "mammalian_display",
            "dms"
          ]
        },
        "target": {
          "type": "object",
          "properties": {
            "target_id": {
              "type": "string",
              "minLength": 1
            },
            "custom": {
              "type": "object",
              "properties": {
                "name": {
                  "type": "string",
                  "minLength": 1
                },
                "antigen_sequence": {
                  "type": "string"
                },
                "notes": {
                  "type": "string"
                }
              },
              "required": [
                "name"
              ]
            }
          }
        },
        "library_design": {
          "type": "object",
          "properties": {
            "mode": {
              "type": "string"
            },
            "diversity_estimate": {
              "type": "integer",
              "minimum": 0
            },
            "notes": {
              "type": "string"
            }
          }
        },
        "sequences": {
          "type": "object",
          "additionalProperties": {
            "type": "string",
            "minLength": 1
          }
        }
      },
      "required": [
        "experiment_type",
        "target",
        "sequences"
      ]
    },
    "idempotency_key": {
      "type": "string",
      "minLength": 8,
      "maxLength": 128
    }
  },
  "required": [
    "experiment_spec"
  ]
}
🟢get_experiment_status(experiment_id)

Poll an experiment by id. Returns the current status (Draft/WaitingForConfirmation/QuoteSent/WaitingForMaterials/LibraryConstruction/Sorting/NGS/DataAnalysis/InReview/Done), the orthogonal results_status (none/partial/all), and the status_log. Cheap; safe to poll every few minutes. Webhooks are preferred for production agents.

入力スキーマ

{
  "type": "object",
  "properties": {
    "experiment_id": {
      "type": "string",
      "minLength": 1
    }
  },
  "required": [
    "experiment_id"
  ]
}
🟢get_experiment_quote(experiment_id)

Fetch the quote for an experiment once status is QuoteSent. Returns quote_id, total_usd, currency (default USD), line_items, valid_until, and terms_url. If status is QuoteSent but the scoping team has not posted a price yet, total_usd is null and a 'note' field explains it is being finalised; poll again until total_usd populates. Pass the quote_id to confirm_quote to accept.

入力スキーマ

{
  "type": "object",
  "properties": {
    "experiment_id": {
      "type": "string",
      "minLength": 1
    }
  },
  "required": [
    "experiment_id"
  ]
}
🟢confirm_quote(quote_id)

Accept a quote. Moves the experiment from QuoteSent to WaitingForMaterials. Call after a human (or budget guard) has approved the total_usd from get_experiment_quote. Returns 409 quote_not_confirmable if status is not QuoteSent, or 409 quote_not_finalized if a price has not been posted yet (total_usd null). Fetch get_experiment_quote and wait for total_usd before confirming.

入力スキーマ

{
  "type": "object",
  "properties": {
    "quote_id": {
      "type": "string",
      "minLength": 1
    }
  },
  "required": [
    "quote_id"
  ]
}
🟢get_experiment_results(experiment_id)

Fetch results once results_status is 'partial' or 'all' (check via get_experiment_status first). Returns per-sequence pre/post counts, log2_enrichment, percentile, called_hit booleans, plus signed download URLs for the enrichment table CSV, hits FASTA, and (when opted in) raw FASTQ. Yeast-display result shape; mammalian and DMS use the same envelope.

入力スキーマ

{
  "type": "object",
  "properties": {
    "experiment_id": {
      "type": "string",
      "minLength": 1
    }
  },
  "required": [
    "experiment_id"
  ]
}

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