DeepDNA
Cited gene, variant (rsID) and CPIC drug–gene lookups for AI agents. Read-only, no key.
Should I use this
Quality & Safety
Findings (1)
- LOWTool 'lookup_variant' description lacks action verbin lookup_variant
Based on automated analysis of tool definitions and protocol compliance.
Context Cost
This is the approximate number of tokens consumed each time the server's tools are loaded into a model's context. Higher counts reduce the attention available for other tasks.
Install
One-Click Install
Add this to your `claude_desktop_config.json` file:
{
"mcpServers": {
"knowledge": {
"url": "https://deepdna.ai/mcp"
}
}
}Remote endpoints
https://deepdna.ai/mcpstreamable-httpWhat it can do
Tool inventory
Tools (4)
🟢list_genes
List the genes in the DeepDNA knowledge base, with a one-line summary and category for each.
Input Schema
{
"type": "object",
"properties": {},
"additionalProperties": false
}🟢lookup_gene(symbol)
Everything curated about one gene: function, key variants with rsIDs, metabolizer or function phenotypes, drug interactions, what a consumer genotyping array can and cannot tell you, and sources.
Input Schema
{
"type": "object",
"properties": {
"symbol": {
"type": "string",
"description": "HGNC gene symbol, e.g. CYP2C19. Case-insensitive."
}
},
"required": [
"symbol"
],
"additionalProperties": false
}🟢lookup_variant(rsid)
One variant by dbSNP rsID: gene, star-allele or common name, alleles, functional effect, population frequency and sources.
Input Schema
{
"type": "object",
"properties": {
"rsid": {
"type": "string",
"description": "dbSNP identifier, e.g. rs4244285."
}
},
"required": [
"rsid"
],
"additionalProperties": false
}🟢lookup_drug_gene(gene, drug)
Pharmacogenomic guidance for a gene, optionally for one drug: guideline (CPIC/DPWG), summary of the recommendation, phenotypes and sources. Omit drug to list every drug curated for that gene.
Input Schema
{
"type": "object",
"properties": {
"gene": {
"type": "string",
"description": "Pharmacogene symbol, e.g. CYP2C19."
},
"drug": {
"type": "string",
"description": "Generic drug name, e.g. clopidogrel. Optional."
}
},
"required": [
"gene"
],
"additionalProperties": false
}Community
Evidence